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[template] OVITO python modifier
OVITO 2.6.0 allows users to program their own modifier in Python. Here provides a template including the common headers and a for-loop for per-particle assignment.
OVITO - The Open Visualization Tool - Version 2.6.1 - has been released
I do like using OVITO for analysis and visualization of my LAMMPS results.
Short Notes on Fuzzy Logic
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Working MATLAB with MS Excel
This is a tutorial to show the installation of Spreadsheet Link EX for use with MATLAB and Excel.
Useful command lines in Ubuntu that help using terminals
My favorite terminal application Terminator allows you to open multiple terminals in one window, which can boost your productivity by operating two or more shells side by side or in...
File I/O and File System in MATLAB
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An Inspiring TED video talking about how we should rethink about the unknown in the postgraduate or research study
Prof. Uri Alon gave an inspiring talk in TED. He pointed out what most PhD students face in their postgraduate studies. We traditionally think science should be objective and rational....
My APEA conference paper is now available on Scientific.Net
Molecular Dynamics Simulation of Plastic Deformation of Diamond at an Elevated Temperature
Tip for scripting LAMMPS: Create And Rename A Folder Based On The Input Variables
In a molecular dynamics study, simulation is often repeated with different sets of parameters, e.g. dimensions, velocity, initial pressure and temperature. If the parameters are defined as variables in the...
Creating an array of SJR widget for visual comparison of journal ranks
Impact factor is very useful for us to rank SCI journals. However, I can’t access Journal Citation Report (JCR) outside my campus. The browsed section losses if the session time...
How to Send a Notification from a LAMMPS Simulation to Your Email
Molecular dynamics simulations often take long computational times, from several hours to a few days. It is a boring job to monitor the progress of simulations. Very often, we switch...